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[ Source: nanopolish  ]

Package: nanopolish (0.14.0-2 and others)

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consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

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Download nanopolish

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.14.0-2 2,142.2 kB9,861.0 kB [list of files]
amd64 0.14.0-2 2,153.9 kB9,654.0 kB [list of files]
arm64 0.14.0-2 2,080.6 kB9,474.0 kB [list of files]
armel 0.14.0-2 2,085.5 kB9,600.0 kB [list of files]
armhf 0.14.0-2 2,090.9 kB9,216.0 kB [list of files]
hppa (unofficial port) 0.14.0-2 2,145.4 kB9,759.0 kB [list of files]
i386 0.14.0-2 2,173.9 kB9,728.0 kB [list of files]
ia64 (unofficial port) 0.14.0-1+b1 2,281.9 kB10,820.0 kB [list of files]
loong64 (unofficial port) 0.14.0-2 2,107.9 kB9,600.0 kB [list of files]
m68k (unofficial port) 0.14.0-2 2,120.9 kB9,688.0 kB [list of files]
mips64el 0.14.0-2 2,108.4 kB9,845.0 kB [list of files]
ppc64 (unofficial port) 0.13.3-2 2,208.6 kB9,987.0 kB [list of files]
ppc64el 0.14.0-2 2,154.3 kB9,794.0 kB [list of files]
riscv64 0.14.0-2 2,145.1 kB9,306.0 kB [list of files]
sh4 (unofficial port) 0.14.0-2 2,236.6 kB9,601.0 kB [list of files]
sparc64 (unofficial port) 0.5.0-1+b1 1,799.8 kB3,490.0 kB [list of files]
x32 (unofficial port) 0.14.0-2 2,154.5 kB9,556.0 kB [list of files]