Pakket: bwa (0.7.19-1 en anderen)

Verwijzigingen voor bwa

Debian bronnen:

Het bronpakket bwa downloaden:

Beheerders:

Debian Med Packaging Team (QA-pagina, Mailarchief)
Charles Plessy (QA-pagina)
Andreas Tille (QA-pagina)
Carlos Borroto (QA-pagina)
Ognyan Kulev (QA-pagina)
Michael R. Crusoe (QA-pagina)

Externe bronnen:

Homepage [bio-bwa.sourceforge.net]

Vergelijkbare pakketten:

Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, interface::text-mode, role::program, Purpose: Analysing, Comparing

Andere aan bwa gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34) [niet alpha, ia64, loong64, sh4]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.41) [loong64, sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: zlib1g (>= 1:1.1.4) [niet armel, armhf, hppa, m68k, sh4]

compressiebibliotheek - programma's

dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, hppa, m68k, sh4]

rec: perl

Larry Wall's Practical Extraction and Report Language

sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats

bwa downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.7.19-1	212,2 kB	514,0 kB	[overzicht]
amd64	0.7.19-1	207,6 kB	461,0 kB	[overzicht]
arm64	0.7.19-1	194,0 kB	449,0 kB	[overzicht]
armel	0.7.19-1	194,8 kB	448,0 kB	[overzicht]
armhf	0.7.19-1	194,3 kB	384,0 kB	[overzicht]
hppa (unofficial port)	0.7.19-1	227,5 kB	513,0 kB	[overzicht]
i386	0.7.19-1	231,1 kB	520,0 kB	[overzicht]
ia64 (unofficial port)	0.7.17-7+b4	280,4 kB	925,0 kB	[overzicht]
loong64 (unofficial port)	0.7.19-1	214,8 kB	513,0 kB	[overzicht]
m68k (unofficial port)	0.7.19-1	205,5 kB	472,0 kB	[overzicht]
mips64el	0.7.19-1	207,5 kB	528,0 kB	[overzicht]
ppc64 (unofficial port)	0.7.19-1	220,3 kB	577,0 kB	[overzicht]
ppc64el	0.7.19-1	230,5 kB	577,0 kB	[overzicht]
riscv64	0.7.19-1	214,9 kB	377,0 kB	[overzicht]
s390x	0.7.19-1	222,8 kB	513,0 kB	[overzicht]
sh4 (unofficial port)	0.7.19-1	276,6 kB	449,0 kB	[overzicht]
sparc64 (unofficial port)	0.7.19-1	185,9 kB	1.093,0 kB	[overzicht]
x32 (unofficial port)	0.7.19-1	217,9 kB	476,0 kB	[overzicht]