Paket: python-cyvcf2 (0.10.4-1)

python-cyvcf2 için bağlantılar

Debian Kaynakları:

cyvcf2 Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

VCF parser based on htslib (Python 2)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 2.

python-cyvcf2 ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.17)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libcurl3-gnutls (>= 7.16.2)

easy-to-use client-side URL transfer library (GnuTLS flavour)
dep: libhts2 (>= 1.2.1)

C library for high-throughput sequencing data formats
dep: liblzma5 (>= 5.1.1alpha+20110809)

XZ-format compression library
dep: libssl1.1 (>= 1.1.0)

Secure Sockets Layer toolkit - shared libraries
dep: python

interactive high-level object-oriented language (Python2 version)

dep: python (<< 2.8)

dep: python (>= 2.7~)
dep: python-numpy (>= 1:1.16.0~rc1)

Numerical Python adds a fast array facility to the Python language
dep: python-numpy-abi9

sanal paketi sağlayan python-numpy
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

sug: python-cyvcf2-doc

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
arm64	734,6 kB	4.524,0 kB	[dosya listesi]