[ Källkod: ampliconnoise ]
Paket: ampliconnoise (1.29-16 och andra)
Länkar för ampliconnoise
Debianresurser:
Hämta källkodspaketet ampliconnoise:
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Andreas Tille (QA-sida)
- Pranav Ballaney (QA-sida)
- Étienne Mollier (QA-sida)
Externa resurser:
- Hemsida [github.com]
Liknande paket:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Andra paket besläktade med ampliconnoise
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- dep: libc6 (>= 2.38) [ej alpha, ia64, loong64, sh4]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.41) [loong64, sh4]
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- dep: libc6.1 (>= 2.37) [ia64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.38) [alpha]
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- dep: libgsl27 (>= 2.7.1) [ia64]
- GNU Scientific Library (GSL) -- library package
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- dep: libgsl28 (>= 2.8+dfsg) [ej ia64]
- GNU Scientific Library (GSL) -- library package
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- dep: libmpich12 [armel, armhf, hppa, i386, m68k, sh4]
- Shared libraries for MPICH
- dep: libmpich12 (>= 4.2.0) [x32]
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- dep: libopenmpi3t64 (>= 4.1.6) [ia64]
- high performance message passing library -- shared library
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- dep: libopenmpi40 (>= 5.0.8) [ej armel, armhf, hppa, i386, ia64, m68k, sh4, x32]
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: mpi-default-bin [ej ia64]
- Standard MPI runtime programs (metapackage)
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- rec: openmpi-bin [ia64]
- high performance message passing library -- binaries
Hämta ampliconnoise
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 1.29-16 | 1.077,3 kbyte | 2.527,0 kbyte | [filförteckning] |
| amd64 | 1.29-16 | 1.085,6 kbyte | 2.055,0 kbyte | [filförteckning] |
| arm64 | 1.29-16 | 1.075,0 kbyte | 2.399,0 kbyte | [filförteckning] |
| armel | 1.29-16 | 1.064,1 kbyte | 2.386,0 kbyte | [filförteckning] |
| armhf | 1.29-16 | 1.058,9 kbyte | 2.386,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 1.29-16 | 1.065,1 kbyte | 1.930,0 kbyte | [filförteckning] |
| i386 | 1.29-16 | 1.081,8 kbyte | 2.054,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 1.29-11 | 1.096,8 kbyte | 2.314,0 kbyte | [filförteckning] |
| loong64 (inofficiell anpassning) | 1.29-16 | 1.081,8 kbyte | 2.527,0 kbyte | [filförteckning] |
| m68k (inofficiell anpassning) | 1.29-16 | 1.054,2 kbyte | 1.930,0 kbyte | [filförteckning] |
| mips64el | 1.29-16 | 1.072,7 kbyte | 2.421,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 1.29-16 | 1.087,2 kbyte | 2.591,0 kbyte | [filförteckning] |
| ppc64el | 1.29-16 | 1.097,3 kbyte | 2.591,0 kbyte | [filförteckning] |
| riscv64 | 1.29-16 | 1.079,1 kbyte | 1.907,0 kbyte | [filförteckning] |
| s390x | 1.29-16 | 1.096,0 kbyte | 2.099,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 1.29-16 | 1.084,4 kbyte | 2.386,0 kbyte | [filförteckning] |
| sparc64 (inofficiell anpassning) | 1.29-16 | 1.066,1 kbyte | 14.890,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 1.29-16 | 1.078,5 kbyte | 2.010,0 kbyte | [filförteckning] |