Package: flye (2.9.6+dfsg-1 and others)
Links for flye
Debian Resources:
Download Source Package flye:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
de novo assembler for single molecule sequencing reads using repeat graphs
Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.
Other Packages Related to flye
|
|
|
|
-
- dep: libc6 (>= 2.38) [not alpha, ia64, loong64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.41) [loong64]
-
- dep: libc6.1 (>= 2.37) [ia64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.38) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [not alpha, ia64, riscv64]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libstdc++6 (>= 13.1) [ia64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 14) [not ia64]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: minimap2
- versatile pairwise aligner for genomic and spliced nucleotide sequences
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-six
- Python 2 and 3 compatibility library
-
- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download flye
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 2.9.6+dfsg-1 | 22,611.2 kB | 37,054.0 kB | [list of files] |
amd64 | 2.9.6+dfsg-1 | 22,656.0 kB | 36,932.0 kB | [list of files] |
arm64 | 2.9.6+dfsg-1 | 22,576.1 kB | 36,731.0 kB | [list of files] |
ia64 (unofficial port) | 2.9.3+dfsg2-1 | 22,763.6 kB | 38,428.0 kB | [list of files] |
loong64 (unofficial port) | 2.9.6+dfsg-1 | 22,603.3 kB | 36,795.0 kB | [list of files] |
mips64el | 2.9.6+dfsg-1 | 22,580.3 kB | 37,035.0 kB | [list of files] |
ppc64 (unofficial port) | 2.9.6+dfsg-1 | 22,637.7 kB | 37,179.0 kB | [list of files] |
ppc64el | 2.9.6+dfsg-1 | 22,648.5 kB | 37,115.0 kB | [list of files] |
riscv64 | 2.9.6+dfsg-1 | 22,634.8 kB | 36,479.0 kB | [list of files] |
s390x | 2.9.6+dfsg-1 | 22,685.6 kB | 37,087.0 kB | [list of files] |