[ Bron: sourmash ]
Pakket: sourmash (4.8.14-3 en anderen)
Verwijzigingen voor sourmash
Debian bronnen:
Het bronpakket sourmash downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Michael R. Crusoe (QA-pagina)
- Debian Rust Maintainers (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
tools for comparing DNA sequences with MinHash sketches
Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
MinHash sketches provide a lightweight way to store “signatures” of large DNA or RNA sequence collections, and then compare or search them using a Jaccard index. MinHash sketches can be used to identify samples, find similar samples, identify data sets with shared sequences, and build phylogenetic trees (Ondov et al. 2015).
sourmash provides a command line script, a Python library, and a CPython module for MinHash sketches.
These tools provide functionality previously handled by the 'khmer' package.
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sourmash downloaden
| Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|---|
| amd64 | 4.8.14-3+b1 | 718,1 kB | 2.498,0 kB | [overzicht] |
| arm64 | 4.8.14-3+b1 | 652,3 kB | 2.394,0 kB | [overzicht] |
| ppc64el | 4.8.14-3+b1 | 715,2 kB | 2.714,0 kB | [overzicht] |
| riscv64 | 4.8.14-3+b1 | 693,7 kB | 2.283,0 kB | [overzicht] |