[ Källkod: spaln ]
Paket: spaln (3.0.2+dfsg-2 och andra)
Länkar för spaln
Debianresurser:
Hämta källkodspaketet spaln:
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
splicing-aware transcript-alignment to genomic DNA
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.
spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.
Andra paket besläktade med spaln
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- dep: libc6 (>= 2.33) [hppa, m68k, sh4, x32]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.38) [riscv64]
- dep: libc6 (>= 2.39) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, sparc64]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgcc-s1 (>= 3.0) [riscv64]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.3.1) [ej hppa, ia64, m68k, riscv64, sh4]
- dep: libgcc-s1 (>= 3.3.4) [sh4]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC stödbibliotek
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC stödbibliotek
-
- dep: libgsl27 (>= 2.7.1) [ia64]
- GNU Scientific Library (GSL) -- library package
-
- dep: libgsl28 (>= 2.8+dfsg) [ej hppa, ia64, m68k, sh4, x32]
- GNU Scientific Library (GSL) -- library package
-
- dep: libgslcblas0 (>= 2.8) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
-
- dep: libstdc++6 (>= 5)
- GNU standardbibliotek v3 för C++
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: spaln-data
- splicing-aware transcript-alignment to genomic DNA (data)
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- dep: zlib1g (>= 1:1.2.0.2)
- Kompressionsbibliotek - körtidspaket
Hämta spaln
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 3.0.2+dfsg-2+b1 | 527,8 kbyte | 2.363,0 kbyte | [filförteckning] |
| amd64 | 3.0.2+dfsg-2+b1 | 567,9 kbyte | 1.945,0 kbyte | [filförteckning] |
| arm64 | 3.0.2+dfsg-2+b1 | 510,3 kbyte | 2.231,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 2.4.7+dfsg-1 | 330,7 kbyte | 799,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 3.0.2+dfsg-2 | 679,9 kbyte | 3.602,0 kbyte | [filförteckning] |
| m68k (inofficiell anpassning) | 2.4.7+dfsg-1 | 306,2 kbyte | 811,0 kbyte | [filförteckning] |
| mips64el | 3.0.2+dfsg-2+b1 | 541,2 kbyte | 2.360,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 3.0.2+dfsg-2+b1 | 566,1 kbyte | 2.819,0 kbyte | [filförteckning] |
| ppc64el | 3.0.2+dfsg-2+b1 | 573,3 kbyte | 2.616,0 kbyte | [filförteckning] |
| riscv64 | 3.0.2+dfsg-2+b1 | 656,4 kbyte | 3.350,0 kbyte | [filförteckning] |
| s390x | 3.0.2+dfsg-2+b1 | 582,8 kbyte | 2.061,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 2.4.7+dfsg-1 | 373,7 kbyte | 713,0 kbyte | [filförteckning] |
| sparc64 (inofficiell anpassning) | 3.0.2+dfsg-2+b1 | 513,1 kbyte | 14.484,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 2.4.7+dfsg-1 | 337,2 kbyte | 813,0 kbyte | [filförteckning] |