[ Bron: spaln ]
Pakket: spaln (3.0.2+dfsg-2 en anderen)
Verwijzigingen voor spaln
Debian bronnen:
Het bronpakket spaln downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
splicing-aware transcript-alignment to genomic DNA
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.
spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.
Andere aan spaln gerelateerde pakketten
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- dep: libc6 (>= 2.33) [hppa, m68k, sh4, x32]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.34) [niet alpha, hppa, ia64, m68k, sh4, x32]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgcc-s1 (>= 3.0) [riscv64]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.3.1) [niet hppa, ia64, m68k, riscv64, sh4]
- dep: libgcc-s1 (>= 3.3.4) [sh4]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support bibliotheek
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support bibliotheek
-
- dep: libgsl27 (>= 2.7.1) [niet hppa, m68k, sh4, x32]
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.7.1) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
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- dep: libstdc++6 (>= 5)
- GNU Standard C++ Library v3
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: spaln-data
- splicing-aware transcript-alignment to genomic DNA (data)
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- dep: zlib1g (>= 1:1.2.0.2)
- compressiebibliotheek - programma's
spaln downloaden
| Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|---|
| alpha (unofficial port) | 3.0.2+dfsg-2 | 527,4 kB | 2.362,0 kB | [overzicht] |
| amd64 | 3.0.2+dfsg-2 | 550,0 kB | 1.901,0 kB | [overzicht] |
| arm64 | 3.0.2+dfsg-2 | 492,8 kB | 2.230,0 kB | [overzicht] |
| hppa (unofficial port) | 2.4.7+dfsg-1 | 330,7 kB | 799,0 kB | [overzicht] |
| ia64 (unofficial port) | 3.0.2+dfsg-2 | 679,9 kB | 3.602,0 kB | [overzicht] |
| m68k (unofficial port) | 2.4.7+dfsg-1 | 306,2 kB | 811,0 kB | [overzicht] |
| mips64el | 3.0.2+dfsg-2 | 529,1 kB | 2.342,0 kB | [overzicht] |
| ppc64 (unofficial port) | 3.0.2+dfsg-2 | 555,4 kB | 2.690,0 kB | [overzicht] |
| ppc64el | 3.0.2+dfsg-2 | 561,4 kB | 2.615,0 kB | [overzicht] |
| riscv64 | 3.0.2+dfsg-2 | 652,4 kB | 3.349,0 kB | [overzicht] |
| s390x | 3.0.2+dfsg-2 | 567,8 kB | 2.024,0 kB | [overzicht] |
| sh4 (unofficial port) | 2.4.7+dfsg-1 | 373,7 kB | 713,0 kB | [overzicht] |
| sparc64 (unofficial port) | 3.0.2+dfsg-2 | 502,1 kB | 14.483,0 kB | [overzicht] |
| x32 (unofficial port) | 2.4.7+dfsg-1 | 337,2 kB | 813,0 kB | [overzicht] |