Paket: r-bioc-genomicalignments (1.42.0-2)

r-bioc-genomicalignments için bağlantılar

Debian Kaynakları:

r-bioc-genomicalignments Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [bioconductor.org]

Benzer paketler:

BioConductor representation and manipulation of short genomic alignments

This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

r-bioc-genomicalignments ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.17) [arm64, ppc64el]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.27) [riscv64]

dep: libc6 (>= 2.4) [amd64, s390x]
dep: r-api-4.0

sanal paketi sağlayan r-base-core
dep: r-api-bioc-3.20

sanal paketi sağlayan r-bioc-biocgenerics
dep: r-bioc-biocgenerics (>= 0.37.0)

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-biostrings (>= 2.55.7)

GNU R string objects representing biological sequences
dep: r-bioc-genomeinfodb (>= 1.13.1)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-genomicranges (>= 1.55.3)

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges (>= 2.23.9)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rsamtools (>= 1.31.2)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: r-bioc-s4vectors (>= 0.27.12)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-summarizedexperiment (>= 1.9.13)

BioConductor assay container

sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-bsgenome

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-deseq2

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-edger

Empirical analysis of digital gene expression data in R
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-rtracklayer

GNU R interface to genome browsers and their annotation tracks
sug: r-bioc-shortread

GNU R classes and methods for high-throughput short-read sequencing data
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-runit

GNU R package providing unit testing framework

r-bioc-genomicalignments indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	2.110,4 kB	3.397,0 kB	[dosya listesi]
arm64	2.109,8 kB	3.453,0 kB	[dosya listesi]
ppc64el	2.111,7 kB	3.453,0 kB	[dosya listesi]
riscv64	2.110,4 kB	3.385,0 kB	[dosya listesi]
s390x	2.109,5 kB	3.397,0 kB	[dosya listesi]