[ Bron: r-bioc-genomicalignments ]
Pakket: r-bioc-genomicalignments (1.42.0-2)
Verwijzigingen voor r-bioc-genomicalignments
Debian bronnen:
Het bronpakket r-bioc-genomicalignments downloaden:
- [r-bioc-genomicalignments_1.42.0-2.dsc]
- [r-bioc-genomicalignments_1.42.0.orig.tar.gz]
- [r-bioc-genomicalignments_1.42.0-2.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [bioconductor.org]
Vergelijkbare pakketten:
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
Andere aan r-bioc-genomicalignments gerelateerde pakketten
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- dep: libc6 (>= 2.17) [arm64, ppc64el]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.4) [amd64, s390x]
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- dep: r-api-4.0
- virtueel pakket geboden door r-base-core
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- dep: r-api-bioc-3.20
- virtueel pakket geboden door r-bioc-biocgenerics
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- dep: r-bioc-biocgenerics (>= 0.37.0)
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-biostrings (>= 2.55.7)
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb (>= 1.13.1)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicranges (>= 1.55.3)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.23.9)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-s4vectors (>= 0.27.12)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.9.13)
- BioConductor assay container
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
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- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
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- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
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- sug: r-bioc-shortread
- GNU R classes and methods for high-throughput short-read sequencing data
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-runit
- GNU R package providing unit testing framework
r-bioc-genomicalignments downloaden
| Platform | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|
| amd64 | 2.110,4 kB | 3.397,0 kB | [overzicht] |
| arm64 | 2.109,8 kB | 3.453,0 kB | [overzicht] |
| ppc64el | 2.111,7 kB | 3.453,0 kB | [overzicht] |
| riscv64 | 2.110,4 kB | 3.385,0 kB | [overzicht] |
| s390x | 2.109,5 kB | 3.397,0 kB | [overzicht] |