Paket: python3-dna-jellyfish (2.3.1-4 ve diğerleri)

python3-dna-jellyfish için bağlantılar

Debian Kaynakları:

jellyfish Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [www.genome.umd.edu]

Benzer paketler:

count k-mers in DNA sequences (Python bindings of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the Python bindings of jellyfish.

python3-dna-jellyfish ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.34) [hppa]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.38) [hppa, ia64, loong64 değil]

dep: libc6 (>= 2.40) [loong64]
dep: libc6.1 (>= 2.31) [ia64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb
dep: libgcc-s1 (>= 3.0) [hppa, ia64, riscv64 değil]

GCC support library

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 4.2) [ia64]
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support library
dep: libjellyfish-2.0-2 (>= 2.3.0) [ia64]

count k-mers in DNA sequences (dynamic library of jellyfish)

dep: libjellyfish-2.0-2 (>= 2.3.1) [ia64 değil]
dep: libstdc++6 (>= 13.1) [ia64 değil]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 9) [ia64]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.10) [ia64]

dep: python3 (<< 3.13) [hppa]

dep: python3 (<< 3.14) [hppa, ia64 değil]

dep: python3 (>= 3.11~) [hppa]

dep: python3 (>= 3.13~) [hppa, ia64 değil]

dep: python3 (>= 3.9~) [ia64]

python3-dna-jellyfish indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	2.3.1-4+b1	55,7 kB	186,0 kB	[dosya listesi]
arm64	2.3.1-4+b1	54,8 kB	239,0 kB	[dosya listesi]
hppa (resmi olmayan port)	2.3.1-2+b1	74,2 kB	384,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	2.3.0-12	67,0 kB	280,0 kB	[dosya listesi]
loong64 (resmi olmayan port)	2.3.1-4+b1	57,2 kB	238,0 kB	[dosya listesi]
mips64el	2.3.1-4+b1	55,2 kB	245,0 kB	[dosya listesi]
ppc64el	2.3.1-4+b1	58,9 kB	239,0 kB	[dosya listesi]
riscv64	2.3.1-4+b1	58,2 kB	171,0 kB	[dosya listesi]