Paket: canu (1.8+dfsg-2)

canu için bağlantılar

Debian Kaynakları:

canu Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [canu.readthedocs.org]

Benzer paketler:

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

canu ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: gnuplot

Command-line driven interactive plotting program.
ayrıca şunun tarafından sağlanan bir sanal paket gnuplot-nox, gnuplot-qt, gnuplot-x11
dep: libc6 (>= 2.14)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libfilesys-df-perl

Module to obtain filesystem disk space information
dep: libgcc1 (>= 1:3.0)

GCC support library
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: mhap (>= 2.1.3)

locality-sensitive hashing to detect long-read overlaps
dep: perl

Larry Wall's Practical Extraction and Report Language

sug: nanopolish

consensus caller for nanopore sequencing data
sug: pbgenomicconsensus

Pacific Biosciences variant and consensus caller

canu indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	1.971,5 kB	12.736,0 kB	[dosya listesi]