[ Källkod: r-bioc-isoformswitchanalyzer ]
Paket: r-bioc-isoformswitchanalyzer (2.6.0+ds-2 och andra)
Länkar för r-bioc-isoformswitchanalyzer
Debianresurser:
Hämta källkodspaketet r-bioc-isoformswitchanalyzer:
- [r-bioc-isoformswitchanalyzer_2.6.0+ds-2.dsc]
- [r-bioc-isoformswitchanalyzer_2.6.0+ds.orig.tar.xz]
- [r-bioc-isoformswitchanalyzer_2.6.0+ds-2.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [bioconductor.org]
Liknande paket:
Identify, Annotate and Visualize Alternative Splicing and
Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data. Analysis of alternative splicing and isoform switches with predicted functional consequences (e.g. gain/loss of protein domains etc.) from quantification of all types of RNASeq by tools such as Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc.
Andra paket besläktade med r-bioc-isoformswitchanalyzer
|
|
|
|
-
- dep: r-api-4.0
- virtuellt paket som tillhandahålls av r-base-core
-
- dep: r-api-bioc-3.16 [x32]
- Paketet inte tillgängligt
-
- dep: r-api-bioc-3.18 [hppa, ia64, sh4]
- Paketet inte tillgängligt
-
- dep: r-api-bioc-3.20 [ej hppa, ia64, sh4, x32]
- virtuellt paket som tillhandahålls av r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel [ej x32]
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.50.0)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
-
- dep: r-bioc-dexseq
- GNU R inference of differential exon usage in RNA-Seq
-
- dep: r-bioc-drimseq [x32]
- Differential transcript usage and tuQTL analyses with
-
- dep: r-bioc-edger
- Empirical analysis of digital gene expression data in R
-
- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-limma
- linear models for microarray data
-
- dep: r-bioc-pfamanalyzer [ej x32]
- GNU R identification of domain isotypes in pfam data
-
- dep: r-bioc-pwalign [ej hppa, ia64, sh4, x32]
- Perform pairwise sequence alignments
-
- dep: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
-
- dep: r-bioc-s4vectors [ej x32]
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-saturn (>= 1.7.0) [ej x32]
- scalable analysis of differential transcript usage for RNA-sequencing
-
- dep: r-bioc-summarizedexperiment [ej x32]
- BioConductor assay container
-
- dep: r-bioc-sva [ej x32]
- GNU R Surrogate Variable Analysis
-
- dep: r-bioc-tximeta (>= 1.7.12)
- Transcript Quantification Import with Automatic Metadata
-
- dep: r-bioc-tximport (>= 1.7.1)
- transcript-level estimates for biological sequencing
-
- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
-
- dep: r-cran-dbi
- GNU R package providing a generic database interface
-
- dep: r-cran-dplyr
- GNU R grammar of data manipulation
-
- dep: r-cran-futile.logger
- logging utility for GNU R
-
- dep: r-cran-ggplot2 [x32]
- implementation of the Grammar of Graphics
- dep: r-cran-ggplot2 (>= 3.3.5) [ej x32]
-
- dep: r-cran-gridextra
- GNU R package with extensions for the grid package
-
- dep: r-cran-magrittr
- GNU R forward-pipe operator
-
- dep: r-cran-plyr
- tools for splitting, applying and combining data
-
- dep: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
-
- dep: r-cran-rcurl
- GNU R General network (HTTP/FTP/...) client interface
-
- dep: r-cran-readr
- GNU R package to read rectangular text data
-
- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
-
- dep: r-cran-stringr
- Make it easier to work with strings
-
- dep: r-cran-tibble
- GNU R Simple Data Frames
-
- dep: r-cran-tidyr [ej x32]
- GNU R package to easily tidy data
-
- dep: r-cran-venndiagram
- Generate High-Resolution Venn and Euler Plots
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
Hämta r-bioc-isoformswitchanalyzer
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 2.6.0+ds-2 | 4.018,0 kbyte | 4.769,0 kbyte | [filförteckning] |
| amd64 | 2.6.0+ds-2 | 4.018,8 kbyte | 4.718,0 kbyte | [filförteckning] |
| arm64 | 2.6.0+ds-2 | 4.018,9 kbyte | 4.770,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 2.2.0+ds-1 | 4.010,0 kbyte | 4.701,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 2.2.0+ds-1 | 4.010,7 kbyte | 4.701,0 kbyte | [filförteckning] |
| loong64 (inofficiell anpassning) | 2.6.0+ds-2 | 4.018,8 kbyte | 4.769,0 kbyte | [filförteckning] |
| mips64el | 2.6.0+ds-2 | 4.019,0 kbyte | 4.770,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 2.6.0+ds-2 | 4.019,1 kbyte | 4.770,0 kbyte | [filförteckning] |
| ppc64el | 2.6.0+ds-2 | 4.019,0 kbyte | 4.770,0 kbyte | [filförteckning] |
| riscv64 | 2.6.0+ds-2 | 4.018,7 kbyte | 4.710,0 kbyte | [filförteckning] |
| s390x | 2.6.0+ds-2 | 4.018,9 kbyte | 4.710,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 2.2.0+ds-1 | 4.009,9 kbyte | 4.761,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 1.20.0+ds-1 | 3.589,3 kbyte | 4.202,0 kbyte | [filförteckning] |