Paket: bali-phy (4.0-1)

Länkar för bali-phy

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Liknande paket:

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

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beror

rekommenderar

föreslår

enhances

dep: libboost-chrono1.83.0t64 (>= 1.83.0)

C++ representation of time duration, time point, and clocks
dep: libboost-json1.83.0 (>= 1.83.0)

C++ containers and algorithms that implement JSON
dep: libboost-program-options1.83.0 (>= 1.83.0)

program options library for C++
dep: libboost-random1.83.0 (>= 1.83.0)

Boost Random Number Library
dep: libc6 (>= 2.38)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libcairo2 (>= 1.4.10)

Cairo 2D vector graphics library
dep: libfmt10 (>= 10.1.1+ds1)

fast type-safe C++ formatting library -- library
dep: libgcc-s1 (>= 3.0) [s390x]

GCC stödbibliotek

dep: libgcc-s1 (>= 3.4) [amd64]

dep: libgcc-s1 (>= 4.2) [ppc64el]

dep: libgcc-s1 (>= 4.5) [arm64, riscv64]

dep: libgcc-s1 (>= 7) [i386]
dep: libstdc++6 (>= 14)

GNU standardbibliotek v3 för C++
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python3

interactive high-level object-oriented language (default python3 version)

rec: gnuplot

Command-line driven interactive plotting program.
också ett virtuellt paket som tillhandahålls av gnuplot-nox, gnuplot-qt, gnuplot-x11
rec: r-base

GNU R statistical computation and graphics system

sug: figtree

graphical phylogenetic tree viewer
sug: seaview

Multiplatform interface for sequence alignment and phylogeny

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Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	9.822,0 kbyte	52.710,0 kbyte	[filförteckning]
arm64	8.730,3 kbyte	47.950,0 kbyte	[filförteckning]
i386	9.253,0 kbyte	51.011,0 kbyte	[filförteckning]
ppc64el	9.592,2 kbyte	56.065,0 kbyte	[filförteckning]
riscv64	10.112,1 kbyte	41.347,0 kbyte	[filförteckning]
s390x	7.548,7 kbyte	48.143,0 kbyte	[filförteckning]