[ Bron: skewer ]
Pakket: skewer (0.2.2-6 en anderen)
Verwijzigingen voor skewer
Debian bronnen:
Het bronpakket skewer downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
Andere aan skewer gerelateerde pakketten
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- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
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- dep: libgcc-s1 (>= 4.2)
- GCC support bibliotheek
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3