[ Source: r-bioc-isoformswitchanalyzer ]
Paketti: r-bioc-isoformswitchanalyzer (2.2.0+ds-1 ja muut)
Links for r-bioc-isoformswitchanalyzer
Debian-palvelut:
Imuroi lähdekoodipaketti r-bioc-isoformswitchanalyzer:
- [r-bioc-isoformswitchanalyzer_2.2.0+ds-1.dsc]
- [r-bioc-isoformswitchanalyzer_2.2.0+ds.orig.tar.xz]
- [r-bioc-isoformswitchanalyzer_2.2.0+ds-1.debian.tar.xz]
Ylläpitäjät:
External Resources:
- Kotisivu [bioconductor.org]
Samankaltaisia paketteja:
Identify, Annotate and Visualize Alternative Splicing and
Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data. Analysis of alternative splicing and isoform switches with predicted functional consequences (e.g. gain/loss of protein domains etc.) from quantification of all types of RNASeq by tools such as Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc.
Muut pakettiin r-bioc-isoformswitchanalyzer liittyvät paketit
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- dep: r-api-4.0
- näennäispaketti, jonka toteuttaa r-base-core
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- dep: r-api-bioc-3.16 [x32]
- Paketti ei saatavilla
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- dep: r-api-bioc-3.18 [ei x32]
- näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
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- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biobase
- base functions for Bioconductor
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- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel [ei x32]
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-biostrings (>= 2.50.0)
- GNU R string objects representing biological sequences
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- dep: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
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- dep: r-bioc-dexseq
- GNU R inference of differential exon usage in RNA-Seq
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- dep: r-bioc-drimseq [x32]
- Differential transcript usage and tuQTL analyses with
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- dep: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-limma
- linear models for microarray data
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- dep: r-bioc-pfamanalyzer [ei x32]
- GNU R identification of domain isotypes in pfam data
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- dep: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
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- dep: r-bioc-s4vectors [ei x32]
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-saturn (>= 1.7.0) [ei x32]
- scalable analysis of differential transcript usage for RNA-sequencing
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- dep: r-bioc-summarizedexperiment [ei x32]
- BioConductor assay container
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- dep: r-bioc-sva [ei x32]
- GNU R Surrogate Variable Analysis
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- dep: r-bioc-tximeta (>= 1.7.12)
- Transcript Quantification Import with Automatic Metadata
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- dep: r-bioc-tximport (>= 1.7.1)
- transcript-level estimates for biological sequencing
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- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
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- dep: r-cran-dbi
- GNU R package providing a generic database interface
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
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- dep: r-cran-futile.logger
- logging utility for GNU R
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- dep: r-cran-ggplot2 [x32]
- implementation of the Grammar of Graphics
- dep: r-cran-ggplot2 (>= 3.3.5) [ei x32]
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- dep: r-cran-gridextra
- GNU R package with extensions for the grid package
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- dep: r-cran-magrittr
- GNU R forward-pipe operator
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- dep: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- dep: r-cran-rcurl
- GNU R General network (HTTP/FTP/...) client interface
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- dep: r-cran-readr
- GNU R package to read rectangular text data
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- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- dep: r-cran-stringr
- Make it easier to work with strings
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- dep: r-cran-tibble
- GNU R Simple Data Frames
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- dep: r-cran-tidyr [ei x32]
- GNU R package to easily tidy data
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- dep: r-cran-venndiagram
- Generate High-Resolution Venn and Euler Plots
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
Imuroi r-bioc-isoformswitchanalyzer
| Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|---|
| alpha (epävirallinen siirros) | 2.2.0+ds-1 | 4,010.0 kt | 4,761.0 kt | [tiedostoluettelo] |
| amd64 | 2.2.0+ds-1 | 4,010.6 kt | 4,709.0 kt | [tiedostoluettelo] |
| arm64 | 2.2.0+ds-1 | 4,010.6 kt | 4,761.0 kt | [tiedostoluettelo] |
| hppa (epävirallinen siirros) | 2.2.0+ds-1 | 4,010.0 kt | 4,701.0 kt | [tiedostoluettelo] |
| ia64 (epävirallinen siirros) | 2.2.0+ds-1 | 4,010.7 kt | 4,701.0 kt | [tiedostoluettelo] |
| mips64el | 2.2.0+ds-1 | 4,010.6 kt | 4,761.0 kt | [tiedostoluettelo] |
| ppc64 (epävirallinen siirros) | 2.2.0+ds-1 | 4,010.4 kt | 4,761.0 kt | [tiedostoluettelo] |
| ppc64el | 2.2.0+ds-1 | 4,010.7 kt | 4,761.0 kt | [tiedostoluettelo] |
| riscv64 | 2.2.0+ds-1 | 4,010.3 kt | 4,701.0 kt | [tiedostoluettelo] |
| s390x | 2.2.0+ds-1 | 4,010.6 kt | 4,701.0 kt | [tiedostoluettelo] |
| sh4 (epävirallinen siirros) | 2.2.0+ds-1 | 4,009.9 kt | 4,761.0 kt | [tiedostoluettelo] |
| x32 (epävirallinen siirros) | 1.20.0+ds-1 | 3,589.3 kt | 4,202.0 kt | [tiedostoluettelo] |