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[ Source: ampliconnoise  ]

Package: ampliconnoise (1.29-9)

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removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tags: Role: Program

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Architecture Package Size Installed Size Files
amd64 1,080.6 kB2,036.0 kB [list of files]
arm64 1,073.3 kB1,960.0 kB [list of files]
armel 1,065.4 kB1,955.0 kB [list of files]
armhf 1,061.2 kB1,819.0 kB [list of files]
i386 1,078.5 kB2,011.0 kB [list of files]
mips64el 1,073.7 kB2,022.0 kB [list of files]
mipsel 1,070.4 kB1,973.0 kB [list of files]
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s390x 1,073.6 kB2,012.0 kB [list of files]