[ 原始碼: ggd-utils ]
套件:ggd-utils(1.0.0+ds-1 以及其他的)
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
其他與 ggd-utils 有關的套件
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- dep: libc6 (>= 2.34) [除 alpha]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6.1-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ppc64, x32]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.4) [alpha, sparc64]
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- dep: libgo22 [alpha, ppc64, sparc64, x32]
- Runtime library for GNU Go applications
下載 ggd-utils
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
alpha (非官方移植版) | 1.0.0+ds-1+b9 | 190。5 kB | 759。0 kB | [檔案列表] |
amd64 | 1.0.0+ds-1+b9 | 1,842。4 kB | 5,300。0 kB | [檔案列表] |
arm64 | 1.0.0+ds-1+b9 | 1,592。7 kB | 5,036。0 kB | [檔案列表] |
armel | 1.0.0+ds-1+b9 | 1,574。9 kB | 5,179。0 kB | [檔案列表] |
armhf | 1.0.0+ds-1+b9 | 1,568。2 kB | 5,155。0 kB | [檔案列表] |
i386 | 1.0.0+ds-1+b9 | 1,700。6 kB | 5,195。0 kB | [檔案列表] |
mips64el | 1.0.0+ds-1+b9 | 1,439。4 kB | 5,823。0 kB | [檔案列表] |
ppc64 (非官方移植版) | 1.0.0+ds-1+b9 | 219。6 kB | 1,088。0 kB | [檔案列表] |
ppc64el | 1.0.0+ds-1+b9 | 1,584。2 kB | 5,163。0 kB | [檔案列表] |
riscv64 (非官方移植版) | 1.0.0+ds-1+b6 | 1,529。0 kB | 4,886。0 kB | [檔案列表] |
s390x | 1.0.0+ds-1+b9 | 1,685。1 kB | 5,556。0 kB | [檔案列表] |
sparc64 (非官方移植版) | 1.0.0+ds-1+b8 | 187。8 kB | 1,274。0 kB | [檔案列表] |
x32 (非官方移植版) | 1.0.0+ds-1+b9 | 199。3 kB | 716。0 kB | [檔案列表] |