[ 原始碼： sibelia ]
套件：sibelia（3.0.7+dfsg-3）
comparative genomics tool
Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.
Sibelia is useful in finding:
1) shared regions, 2) regions that present in one group of genomes but not in others, 3) rearrangements that transform one genome to other genomes.
其他與 sibelia 有關的套件
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- dep: lagan
- highly parametrizable pairwise global genome sequence aligner
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- dep: libc6 (>= 2.4)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libdivsufsort3 (>= 2.0.1)
- fast suffix array construction
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- dep: libgcc-s1 (>= 3.5)
- GCC 支援函式庫
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- sug: sibelia-examples
- comparative genomics tool (example data)