套件：r-bioc-dropletutils（1.22.0+ds-1 以及其他的） [debports]
BioConductor utilities for handling single-cell droplet data
Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.
其他與 r-bioc-dropletutils 有關的套件
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- dep: libc6.1 (>= 2.29)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
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- dep: libgcc-s1 (>= 3.4)
- GCC 支援函式庫
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- dep: libhdf5-103-1t64
- HDF5 C runtime files - serial version
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- dep: libhdf5-cpp-103-1t64 (>= 1.10.5)
- HDF5 - C++ runtime files - serial version
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.18
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-bioc-beachmat
- I/O for several formats storing matrix data
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- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-delayedarray
- BioConductor delayed operations on array-like objects
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- dep: r-bioc-delayedmatrixstats
- Functions on Rows and Columns of 'DelayedMatrix' Objects
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- dep: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-hdf5array
- HDF5 backend for DelayedArray objects
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rhdf5
- BioConductor HDF5 interface to R
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- dep: r-bioc-rhdf5lib
- GNU R hdf5 library
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- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-scuttle
- BioConductor single-cell RNA-Seq analysis utilities
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- dep: r-bioc-singlecellexperiment
- S4 Classes for Single Cell Data
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- dep: r-bioc-summarizedexperiment
- BioConductor assay container
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- dep: r-cran-bh
- (Virtual) GNU R package to provide BH
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- dep: r-cran-dqrng
- GNU R fast pseudo random number generators
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- dep: r-cran-matrix
- GNU R package of classes for dense and sparse matrices
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- dep: r-cran-r.utils
- GNU R various programming utilities
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- dep: r-cran-rcpp
- GNU R package for Seamless R and C++ Integration
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-cran-jsonlite
- Robust, High Performance JSON Parser and Generator for R
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-testthat
- GNU R testsuite