软件包：fastqtl（2.184+v7+dfsg-4 以及其他的） [debports]
Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes
The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.
其他与 fastqtl 有关的软件包
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虚包由这些包填实： libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
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- dep: libboost-program-options1.83.0 (>= 1.83.0)
- program options library for C++
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- dep: libbz2-1.0
- 高品质块排序文件压缩程序库 - 运行时库
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- dep: libc6 (>= 2.38)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libgcc-s1 (>= 3.4)
- GCC 支持库
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- dep: libgsl28 (>= 2.8+dfsg)
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.8)
- GNU Scientific Library (GSL) -- blas library package
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 14)
- GNU 标准 C++ 库，第3版
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: r-mathlib (>= 4.4.1)
- GNU R standalone mathematics library
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- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时
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- rec: r-cran-argparser
- GNU R command-line argument parser
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- rec: r-cran-qvalue
- 软件包暂时不可用
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- rec: r-cran-tools
- 软件包暂时不可用
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- sug: fastqtl-doc
- QTL mapper in cis for molecular phenotypes - documentation