[ Source: skewer ]
Package: skewer (0.2.2-6 and others)
Links for skewer
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Download Source Package skewer:
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External Resources:
- Homepage [github.com]
Similar packages:
post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
Other Packages Related to skewer
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [not armel, armhf, i386]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386]
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
Download skewer
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 0.2.2-6+b1 | 86.4 kB | 216.0 kB | [list of files] |
| arm64 | 0.2.2-6+b1 | 76.4 kB | 235.0 kB | [list of files] |
| armel | 0.2.2-6+b1 | 75.2 kB | 235.0 kB | [list of files] |
| armhf | 0.2.2-6+b1 | 75.5 kB | 171.0 kB | [list of files] |
| i386 | 0.2.2-6+b1 | 90.2 kB | 231.0 kB | [list of files] |
| mips64el | 0.2.2-6+b1 | 81.5 kB | 242.0 kB | [list of files] |
| ppc64el | 0.2.2-6+b1 | 84.9 kB | 236.0 kB | [list of files] |
| s390x | 0.2.2-6+b1 | 76.0 kB | 199.0 kB | [list of files] |