Paket: fastahack (1.0.0+dfsg-11) [debports]

fastahack için bağlantılar

Debian Kaynakları:

Hata Raporları

Kaynak Paketini İndir:

Bulunamadı

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

utility for indexing and sequence extraction from FASTA files

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

fastahack ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 1.0.0+dfsg)

library for indexing and sequence extraction from FASTA files (lib)
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3

fastahack indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
x32 (resmi olmayan port)	12,0 kB	39,0 kB	[dosya listesi]