Paket: r-bioc-variantannotation (1.52.0-2 ve diğerleri)

r-bioc-variantannotation için bağlantılar

Debian Kaynakları:

r-bioc-variantannotation Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [bioconductor.org]

Benzer paketler:

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

r-bioc-variantannotation ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libbz2-1.0 [hppa, m68k, sh4, sparc64, x32 değil]

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.15) [m68k, sparc64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.34) [alpha, ia64, loong64, m68k, sh4, sparc64 değil]

dep: libc6 (>= 2.37) [sh4]

dep: libc6 (>= 2.40) [loong64]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libcurl4 (>= 7.18.0) [hppa, ia64, sh4, x32]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libcurl4t64 (>= 7.18.0) [hppa, ia64, m68k, sh4, sparc64, x32 değil]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: liblzma5 (>= 5.1.1alpha+20120614) [hppa, m68k, sh4, sparc64, x32 değil]

XZ-format compression library
dep: r-api-3.4 [m68k]

Paket mevcut değil
dep: r-api-3.5 [sparc64]

Paket mevcut değil
dep: r-api-4.0 [m68k, sparc64 değil]

sanal paketi sağlayan r-base-core
dep: r-api-bioc-3.16 [x32]

Paket mevcut değil
dep: r-api-bioc-3.18 [hppa, ia64, sh4]

Paket mevcut değil
dep: r-api-bioc-3.20 [hppa, ia64, m68k, sh4, sparc64, x32 değil]

sanal paketi sağlayan r-bioc-biocgenerics
dep: r-api-bioc-3.8 [sparc64]

Paket mevcut değil
dep: r-base-core (>= 3.4.3-1) [m68k]

GNU R core of statistical computation and graphics system

dep: r-base-core (>= 3.5.2-1) [sparc64]

dep: r-base-core (>= 4.2.2.20221110-2) [x32]
dep: r-bioc-annotationdbi (>= 1.27.9)

GNU R Annotation Database Interface for BioConductor
dep: r-bioc-biobase

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.15.3) [m68k, sparc64]

generic functions for Bioconductor

dep: r-bioc-biocgenerics (>= 0.37.0) [m68k, sparc64 değil]
dep: r-bioc-biostrings (>= 2.33.5) [m68k]

GNU R string objects representing biological sequences

dep: r-bioc-biostrings (>= 2.47.6) [sparc64]

dep: r-bioc-biostrings (>= 2.57.2) [m68k, sparc64 değil]
dep: r-bioc-bsgenome (>= 1.37.6) [m68k]

BioConductor infrastructure for Biostrings-based genome data packages

dep: r-bioc-bsgenome (>= 1.47.3) [m68k değil]
dep: r-bioc-genomeinfodb (>= 1.11.4) [m68k]

BioConductor utilities for manipulating chromosome identifiers

dep: r-bioc-genomeinfodb (>= 1.15.2) [m68k değil]
dep: r-bioc-genomicfeatures (>= 1.27.4) [m68k]

GNU R tools for making and manipulating transcript centric annotations

dep: r-bioc-genomicfeatures (>= 1.31.3) [m68k değil]
dep: r-bioc-genomicranges (>= 1.27.6) [m68k]

BioConductor representation and manipulation of genomic intervals

dep: r-bioc-genomicranges (>= 1.31.8) [sparc64]

dep: r-bioc-genomicranges (>= 1.41.5) [m68k, sparc64 değil]
dep: r-bioc-iranges (>= 2.13.13) [sparc64]

GNU R low-level containers for storing sets of integer ranges

dep: r-bioc-iranges (>= 2.23.9) [m68k, sparc64 değil]

dep: r-bioc-iranges (>= 2.3.25) [m68k]
dep: r-bioc-matrixgenerics [m68k, sparc64 değil]

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
dep: r-bioc-rhtslib (>= 1.99.3) [hppa, ia64, sh4, x32]

HTSlib high-throughput sequencing library as GNU R package

dep: r-bioc-rhtslib (>= 2.99.0) [hppa, ia64, m68k, sh4, sparc64, x32 değil]
dep: r-bioc-rsamtools (>= 1.23.10) [m68k]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

dep: r-bioc-rsamtools (>= 1.33.6) [sparc64]

dep: r-bioc-rsamtools (>= 1.99.0) [hppa, ia64, sh4, x32]

dep: r-bioc-rsamtools (>= 2.19.1) [hppa, ia64, m68k, sh4, sparc64, x32 değil]
dep: r-bioc-rtracklayer (>= 1.25.16) [m68k]

GNU R interface to genome browsers and their annotation tracks

dep: r-bioc-rtracklayer (>= 1.39.7) [m68k değil]
dep: r-bioc-s4vectors (>= 0.13.13) [m68k]

BioConductor S4 implementation of vectors and lists

dep: r-bioc-s4vectors (>= 0.17.24) [sparc64]

dep: r-bioc-s4vectors (>= 0.27.12) [m68k, sparc64 değil]
dep: r-bioc-summarizedexperiment (>= 1.19.5) [m68k, sparc64 değil]

BioConductor assay container

dep: r-bioc-summarizedexperiment (>= 1.5.3) [m68k]

dep: r-bioc-summarizedexperiment (>= 1.9.9) [sparc64]
dep: r-bioc-xvector (>= 0.19.7) [sparc64]

BioConductor representation and manpulation of external sequences

dep: r-bioc-xvector (>= 0.29.2) [m68k, sparc64 değil]

dep: r-bioc-xvector (>= 0.5.6) [m68k]
dep: r-bioc-zlibbioc [m68k değil]

(Virtual) zlibbioc Bioconductor package
dep: r-cran-dbi

GNU R package providing a generic database interface
dep: zlib1g (>= 1:1.2.3.3) [hppa, sh4, x32 değil]

compression library - runtime

rec: r-bioc-snpstats

BioConductor SnpMatrix and XSnpMatrix classes and methods
rec: r-cran-runit

GNU R package providing unit testing framework

sug: r-bioc-annotationhub

GNU R client to access AnnotationHub resources
sug: r-bioc-biocstyle [m68k, sparc64 değil]

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-snpstats [sparc64 değil]

BioConductor SnpMatrix and XSnpMatrix classes and methods
sug: r-cran-ggplot2

implementation of the Grammar of Graphics
sug: r-cran-httr [hppa, ia64, m68k, sh4, sparc64, x32 değil]

GNU R tools for working with URLs and HTTP
sug: r-cran-jsonlite [hppa, ia64, m68k, sh4, sparc64, x32 değil]

Robust, High Performance JSON Parser and Generator for R
sug: r-cran-knitr [m68k, sparc64, x32 değil]

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-magick [hppa, ia64, m68k, sh4, sparc64, x32 değil]

advanced graphics and image-processing in GNU R
sug: r-cran-runit [sparc64 değil]

GNU R package providing unit testing framework

r-bioc-variantannotation indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	1.52.0-2	3.471,7 kB	6.950,0 kB	[dosya listesi]
amd64	1.52.0-2	3.465,5 kB	6.805,0 kB	[dosya listesi]
arm64	1.52.0-2	3.448,2 kB	6.821,0 kB	[dosya listesi]
hppa (resmi olmayan port)	1.48.1-1	3.434,8 kB	6.221,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	1.48.1-1+b1	3.527,1 kB	6.992,0 kB	[dosya listesi]
loong64 (resmi olmayan port)	1.52.0-2	3.471,1 kB	6.884,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.24.2-1	2.311,9 kB	2.941,0 kB	[dosya listesi]
mips64el	1.52.0-2	3.437,9 kB	6.923,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	1.52.0-2	3.499,1 kB	7.212,0 kB	[dosya listesi]
ppc64el	1.52.0-2	3.498,9 kB	7.077,0 kB	[dosya listesi]
riscv64	1.52.0-2	3.477,2 kB	6.657,0 kB	[dosya listesi]
s390x	1.52.0-2	3.479,5 kB	6.905,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	1.48.1-1	3.463,5 kB	5.991,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.28.10-1	2.919,0 kB	4.040,0 kB	[dosya listesi]
x32 (resmi olmayan port)	1.44.1-1	3.556,8 kB	5.071,0 kB	[dosya listesi]