Paket: umis (1.0.9-1)

umis için bağlantılar

Debian Kaynakları:

umis Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

tools for processing UMI RNA-tag data

Umis provides tools for estimating expression in RNA-Seq data which performs sequencing of end tags of transcript, and incorporate molecular tags to correct for amplification bias.

There are four steps in this process.

 1. Formatting reads
 2. Filtering noisy cellular barcodes
 3. Pseudo-mapping to cDNAs
 4. Counting molecular identifiers

umis ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.17)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.12)

dep: python3 (>= 3.11~)
dep: python3-click

Wrapper around optparse for command line utilities - Python 3.x
dep: python3-pandas

data structures for "relational" or "labeled" data
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: python3-regex

alternative regular expression module (Python 3)
dep: python3-scipy

scientific tools for Python 3
dep: python3-toolz

List processing tools and functional utilities

sug: umis-examples

tools for processing UMI RNA-tag data (examples)

umis indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64el	26,4 kB	156,0 kB	[dosya listesi]