Paket: lumpy-sv (0.3.1+dfsg-7 ve diğerleri)

lumpy-sv için bağlantılar

Debian Kaynakları:

lumpy-sv Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

general probabilistic framework for structural variant discovery

LUMPY, a novel SV discovery framework that naturally integrates multiple SV signals jointly across multiple samples. LUMPY yields improved sensitivity, especially when SV signal is reduced owing to either low coverage data or low intra-sample variant allele frequency.

lumpy-sv ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: bamkit

tools for common BAM file manipulations
dep: libbamtools2.5.2 (>= 2.5.2+dfsg)

dynamic library for manipulating BAM (genome alignment) files
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgzstream0 (>= 1.5+dfsg)

provide functionality of zlib C-library in a C++ iostream
dep: libhts3t64 (>= 1.17)

C library for high-throughput sequencing data formats
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-numpy

Fast array facility to the Python language (Python 3)
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: samblaster

marks duplicates, extracts discordant/split reads
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats

rec: sambamba

tools for working with SAM/BAM data

lumpy-sv indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64el	0.3.1+dfsg-7+b1	194,5 kB	805,0 kB	[dosya listesi]