Paket: progressivemauve (1.2.0+4713+dfsg-5 ve diğerleri)
progressivemauve için bağlantılar
Debian Kaynakları:
- Hata Raporları
- Developer Information
- Debian Değişim Günlüğü
- Telif Hakkı Dosyası
- Debian Yama Takipçisi
progressivemauve Kaynak Paketini İndir:
- [progressivemauve_1.2.0+4713+dfsg-5.dsc]
- [progressivemauve_1.2.0+4713+dfsg.orig.tar.xz]
- [progressivemauve_1.2.0+4713+dfsg-5.debian.tar.xz]
Geliştiriciler:
Dış Kaynaklar:
- Ana Sayfa [darlinglab.org]
Benzer paketler:
multiple genome alignment algorithms
The mauveAligner and progressiveMauve alignment algorithms have been implemented as command-line programs included with the downloadable Mauve software. When run from the command-line, these programs provide options not yet available in the graphical interface.
Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.
Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.
Mauve is developed at the University of Wisconsin.
progressivemauve ile İlgili Diğer Paketler
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- dep: libboost-filesystem1.83.0 (>= 1.83.0)
- filesystem operations (portable paths, iteration over directories, etc) in C++
-
- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
-
- dep: libboost-program-options1.83.0 (>= 1.83.0)
- program options library for C++
-
- dep: libc6 (>= 2.34) [arm64 değil]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
-
- dep: libgcc-s1 (>= 3.0) [arm64, ppc64el, s390x]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [amd64, riscv64]
- dep: libgcc-s1 (>= 3.5) [armhf]
- dep: libgcc-s1 (>= 4.2) [i386]
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- dep: libgenome0 (>= 1.3.11+svn20110227.4616)
- toolkit for developing bioinformatic related software
-
- dep: libmems1t64 (>= 1.6.0+4725)
- library to support DNA string matching and comparative genomics
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- dep: libstdc++6 (>= 13.1) [arm64 değil]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 14) [arm64]
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- enh: mauve-aligner
- multiple genome alignment
progressivemauve indir
| Mimari | Sürüm | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|---|
| amd64 | 1.2.0+4713+dfsg-5+b3 | 850,6 kB | 5.393,0 kB | [dosya listesi] |
| arm64 | 1.2.0+4713+dfsg-5+b4 | 815,3 kB | 5.775,0 kB | [dosya listesi] |
| armhf | 1.2.0+4713+dfsg-5+b3 | 668,8 kB | 3.070,0 kB | [dosya listesi] |
| i386 | 1.2.0+4713+dfsg-5+b3 | 842,1 kB | 5.254,0 kB | [dosya listesi] |
| ppc64el | 1.2.0+4713+dfsg-5+b3 | 877,5 kB | 6.863,0 kB | [dosya listesi] |
| riscv64 | 1.2.0+4713+dfsg-5+b3 | 939,3 kB | 4.687,0 kB | [dosya listesi] |
| s390x | 1.2.0+4713+dfsg-5+b3 | 729,4 kB | 5.366,0 kB | [dosya listesi] |