Paket: pbhoney (15.8.24+dfsg-3)

pbhoney için bağlantılar

Debian Kaynakları:

pbsuite Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [sourceforge.net]

Benzer paketler:

genomic structural variation discovery

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

PBHoney is part of the PBSuite.

pbhoney ile İlgili Diğer Paketler

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dep: blasr (>= 5.3)

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dep: python

interactive high-level object-oriented language (Python2 version)
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general-purpose Python interface to hdf5 (Python 2)
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Interval tree convenience classes for genomic data -- Python 2 library
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dep: python-numpy

Numerical Python adds a fast array facility to the Python language
dep: python-pbbanana (= 15.8.24+dfsg-3)

additional utilities for the pbsuite
dep: python-pbsuite-utils (= 15.8.24+dfsg-3)

software for Pacific Biosciences sequencing data -- Python utilities
dep: python-pysam (>= 0.8.0)

interface for the SAM/BAM sequence alignment and mapping format (Python 2)
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats

rec: pbdagcon

sequence consensus using directed acyclic graphs

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	1.280,3 kB	2.356,0 kB	[dosya listesi]