Paket: r-bioc-dropletutils (1.26.0+ds-2 och andra)

Länkar för r-bioc-dropletutils

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Hämta källkodspaketet r-bioc-dropletutils:

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Externa resurser:

Hemsida [bioconductor.org]

Liknande paket:

BioConductor utilities for handling single-cell droplet data

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

Andra paket besläktade med r-bioc-dropletutils

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.27) [riscv64]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.29) [ej alpha, ia64, loong64, riscv64, sh4]

dep: libc6 (>= 2.37) [sh4]

dep: libc6 (>= 2.40) [loong64]
dep: libc6.1 (>= 2.29) [alpha]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libgcc-s1 (>= 3.0) [ej alpha, hppa, ia64, riscv64, sh4, sparc64]

GCC stödbibliotek

dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

dep: libgcc-s1 (>= 4.2) [ia64, sh4]
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC stödbibliotek
dep: libhdf5-103-1 [x32]

HDF5 C runtime files - serial version
dep: libhdf5-103-1t64 [hppa, ia64, sh4]

HDF5 C runtime files - serial version
dep: libhdf5-310 (>= 1.14.3) [ej hppa, ia64, sh4, x32]

HDF5 C runtime files - serial version
dep: libhdf5-cpp-103-1 (>= 1.10.5) [x32]

HDF5 - C++ runtime files - serial version
dep: libhdf5-cpp-103-1t64 (>= 1.10.5) [hppa, ia64, sh4]

HDF5 - C++ runtime files - serial version
dep: libhdf5-cpp-310 (>= 1.14.3) [ej hppa, ia64, sh4, x32]

HDF5 - C++ runtime files - serial version
dep: libstdc++6 (>= 11) [x32]

GNU standardbibliotek v3 för C++

dep: libstdc++6 (>= 13.1) [hppa, ia64, sh4]

dep: libstdc++6 (>= 14) [ej hppa, ia64, sh4, x32]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: r-api-4.0

virtuellt paket som tillhandahålls av r-base-core
dep: r-api-bioc-3.16 [x32]

Paketet inte tillgängligt
dep: r-api-bioc-3.18 [hppa, ia64, sh4]

Paketet inte tillgängligt
dep: r-api-bioc-3.20 [ej hppa, ia64, sh4, x32]

virtuellt paket som tillhandahålls av r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1) [x32]

GNU R core of statistical computation and graphics system
dep: r-bioc-beachmat

I/O for several formats storing matrix data
dep: r-bioc-biocgenerics

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-delayedarray [hppa, ia64, sh4, x32]

BioConductor delayed operations on array-like objects

dep: r-bioc-delayedarray (>= 0.31.9) [ej hppa, ia64, sh4, x32]
dep: r-bioc-delayedmatrixstats

Functions on Rows and Columns of 'DelayedMatrix' Objects
dep: r-bioc-edger

Empirical analysis of digital gene expression data in R
dep: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-hdf5array

HDF5 backend for DelayedArray objects
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rhdf5

BioConductor HDF5 interface to R
dep: r-bioc-rhdf5lib

GNU R hdf5 library
dep: r-bioc-s4vectors

BioConductor S4 implementation of vectors and lists
dep: r-bioc-scuttle

BioConductor single-cell RNA-Seq analysis utilities
dep: r-bioc-singlecellexperiment

S4 Classes for Single Cell Data
dep: r-bioc-sparsearray (>= 1.5.18) [ej hppa, ia64, sh4, x32]

efficient in-memory representation of multidimensional sparse arrays
dep: r-bioc-summarizedexperiment

BioConductor assay container
dep: r-cran-bh

(Virtual) GNU R package to provide BH
dep: r-cran-dqrng

GNU R fast pseudo random number generators
dep: r-cran-matrix

GNU R package of classes for dense and sparse matrices
dep: r-cran-r.utils

GNU R various programming utilities
dep: r-cran-rcpp

GNU R package for Seamless R and C++ Integration

sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-cran-jsonlite

Robust, High Performance JSON Parser and Generator for R
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

Hämta r-bioc-dropletutils

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	1.26.0+ds-2	393,3 kbyte	833,0 kbyte	[filförteckning]
amd64	1.26.0+ds-2	401,4 kbyte	765,0 kbyte	[filförteckning]
arm64	1.26.0+ds-2	384,0 kbyte	769,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	1.22.0+ds-1+b1	384,2 kbyte	775,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	1.22.0+ds-1+b1	404,7 kbyte	1.078,0 kbyte	[filförteckning]
loong64 (inofficiell anpassning)	1.26.0+ds-2	392,5 kbyte	769,0 kbyte	[filförteckning]
mips64el	1.26.0+ds-2	382,6 kbyte	859,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	1.26.0+ds-2	401,7 kbyte	901,0 kbyte	[filförteckning]
ppc64el	1.26.0+ds-2	400,8 kbyte	897,0 kbyte	[filförteckning]
riscv64	1.26.0+ds-2	400,7 kbyte	688,0 kbyte	[filförteckning]
s390x	1.26.0+ds-2	401,3 kbyte	785,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	1.22.0+ds-1+b1	400,3 kbyte	760,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	1.26.0+ds-2	375,5 kbyte	1.416,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	1.18.1+ds-1	380,4 kbyte	693,0 kbyte	[filförteckning]