Paket: r-bioc-dropletutils (1.18.1+ds-1)

Länkar för r-bioc-dropletutils

Debianresurser:

Hämta källkodspaketet r-bioc-dropletutils:

Ansvariga:

Externa resurser:

Hemsida [bioconductor.org]

Liknande paket:

BioConductor utilities for handling single-cell droplet data

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

Andra paket besläktade med r-bioc-dropletutils

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.29)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgcc-s1 (>= 3.0) [ej armel, armhf, mipsel]

GCC stödbibliotek

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [mipsel]
dep: libhdf5-103-1

HDF5 C runtime files - serial version
dep: libhdf5-cpp-103-1 (>= 1.10.5)

HDF5 - C++ runtime files - serial version
dep: libstdc++6 (>= 11)

GNU standardbibliotek v3 för C++
dep: r-api-4.0

virtuellt paket som tillhandahålls av r-base-core
dep: r-api-bioc-3.16

virtuellt paket som tillhandahålls av r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-beachmat

I/O for several formats storing matrix data
dep: r-bioc-biocgenerics

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-delayedarray

BioConductor delayed operations on array-like objects
dep: r-bioc-delayedmatrixstats

Functions on Rows and Columns of 'DelayedMatrix' Objects
dep: r-bioc-edger

Empirical analysis of digital gene expression data in R
dep: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-hdf5array

HDF5 backend for DelayedArray objects
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rhdf5

BioConductor HDF5 interface to R
dep: r-bioc-rhdf5lib

GNU R hdf5 library
dep: r-bioc-s4vectors

BioConductor S4 implementation of vectors and lists
dep: r-bioc-scuttle

BioConductor single-cell RNA-Seq analysis utilities
dep: r-bioc-singlecellexperiment

S4 Classes for Single Cell Data
dep: r-bioc-summarizedexperiment

BioConductor assay container
dep: r-cran-bh

(Virtual) GNU R package to provide BH
dep: r-cran-dqrng

GNU R fast pseudo random number generators
dep: r-cran-matrix

GNU R package of classes for dense and sparse matrices
dep: r-cran-r.utils

GNU R various programming utilities
dep: r-cran-rcpp

GNU R package for Seamless R and C++ Integration

sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-cran-jsonlite

Robust, High Performance JSON Parser and Generator for R
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

Hämta r-bioc-dropletutils

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	381,6 kbyte	718,0 kbyte	[filförteckning]
arm64	364,5 kbyte	758,0 kbyte	[filförteckning]
armel	362,9 kbyte	693,0 kbyte	[filförteckning]
armhf	365,0 kbyte	628,0 kbyte	[filförteckning]
i386	384,2 kbyte	736,0 kbyte	[filförteckning]
mips64el	362,4 kbyte	847,0 kbyte	[filförteckning]
mipsel	360,7 kbyte	769,0 kbyte	[filförteckning]
ppc64el	381,3 kbyte	822,0 kbyte	[filförteckning]
s390x	371,7 kbyte	742,0 kbyte	[filförteckning]