Paket: libjellyfish-2.0-2 (2.3.1-3 och andra)
Länkar för libjellyfish-2.0-2
Debianresurser:
Hämta källkodspaketet jellyfish:
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Shaun Jackman (QA-sida)
- Andreas Tille (QA-sida)
- Michael R. Crusoe (QA-sida)
- Étienne Mollier (QA-sida)
Externa resurser:
- Hemsida [www.genome.umd.edu]
Liknande paket:
count k-mers in DNA sequences (dynamic library of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the dynamic library the main executable of jellyfish is linked to.
Andra paket besläktade med libjellyfish-2.0-2
|
|
|
|
-
- dep: libc6 (>= 2.34) [ej ia64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
-
- dep: libc6.1 (>= 2.31) [ia64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
-
- dep: libgcc-s1 (>= 3.0) [ej hppa, ia64]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC stödbibliotek
-
- dep: libstdc++6 (>= 13.1) [ej ia64]
- GNU standardbibliotek v3 för C++
- dep: libstdc++6 (>= 9) [ia64]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
Hämta libjellyfish-2.0-2
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| amd64 | 2.3.1-3+b4 | 65,6 kbyte | 205,0 kbyte | [filförteckning] |
| arm64 | 2.3.1-3+b4 | 60,6 kbyte | 220,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 2.3.1-2+b1 | 66,9 kbyte | 208,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 2.3.0-12 | 75,2 kbyte | 315,0 kbyte | [filförteckning] |
| mips64el | 2.3.1-3+b4 | 60,7 kbyte | 233,0 kbyte | [filförteckning] |
| ppc64el | 2.3.1-3+b4 | 69,6 kbyte | 285,0 kbyte | [filförteckning] |
| riscv64 | 2.3.1-3+b4 | 65,0 kbyte | 172,0 kbyte | [filförteckning] |