[ Källkod: stacks ]
Paket: stacks (2.2+dfsg-1)
Länkar för stacks
Debianresurser:
Hämta källkodspaketet stacks:
Ansvariga:
Externa resurser:
- Hemsida [creskolab.uoregon.edu]
Liknande paket:
pipeline for building loci from short-read DNA sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>
Andra paket besläktade med stacks
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- dep: libc6 (>= 2.17)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libdbi-perl
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- dep: libgcc1 (>= 1:3.0) [ej armhf]
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- dep: libgcc1 (>= 1:3.5) [armhf]
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- dep: libhts2 (>= 1.0)
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- dep: libstdc++6 (>= 5.2)
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- dep: python
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- dep: zlib1g (>= 1:1.2.6)
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- rec: libspreadsheet-writeexcel-perl
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Hämta stacks
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 927,4 kbyte | 4.887,0 kbyte | [filförteckning] |
| arm64 | 814,6 kbyte | 4.373,0 kbyte | [filförteckning] |
| armhf | 772,8 kbyte | 2.869,0 kbyte | [filförteckning] |