Pakiet: libvcflib-tools (1.0.2+dfsg-2)

Odnośniki dla libvcflib-tools

Zasoby systemu Debian:

Pobieranie pakietu źródłowego libvcflib:

Opiekunowie:

Zasoby zewnętrzne:

Strona internetowa [github.com]

Podobne pakiety:

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

Inne pakiety związane z libvcflib-tools

wymaga

poleca

sugeruje

enhances

dep: libc6 (>= 2.29)

Biblioteka GNU C: biblioteki współdzielone
również pakiet wirtualny udostępniany przez libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f+dfsg-5~) [amd64, arm64, mips64el, ppc64el]

library for indexing and sequence extraction from FASTA files (lib)

dep: libfastahack0 (>= 1.0.0+dfsg) [nie amd64, arm64, mips64el, ppc64el]
dep: libgcc-s1 (>= 3.0) [nie armel, armhf, ppc64el]

Biblioteka wspomagająca GCC

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 5.2) [armel, armhf]

Standardowa biblioteka GNU C++, wersja 3

dep: libstdc++6 (>= 9) [nie armel, armhf]
dep: libtabixpp0 (>= 1.0.0)

C++ wrapper to tabix indexer
dep: libvcflib1 (>= 1.0.2+dfsg)

C++ library for parsing and manipulating VCF files
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-gridbase

GNU R Integration of base and grid graphics
dep: r-cran-plyr

tools for splitting, applying and combining data

sug: r-cran-pracma

practical numerical math functions for GNU R

Pobieranie libvcflib-tools

Pobierz dla wszystkich dostępnych architektur
Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	703,5 KiB	4 707,0 KiB	[lista plików]
arm64	641,8 KiB	4 099,0 KiB	[lista plików]
armel	604,0 KiB	3 654,0 KiB	[lista plików]
armhf	624,0 KiB	2 950,0 KiB	[lista plików]
i386	741,8 KiB	4 758,0 KiB	[lista plików]
mips64el	633,4 KiB	4 721,0 KiB	[lista plików]
mipsel	639,3 KiB	4 453,0 KiB	[lista plików]
ppc64el	703,5 KiB	7 435,0 KiB	[lista plików]
s390x	647,7 KiB	4 471,0 KiB	[lista plików]