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Pakket: python3-mappy (2.27+dfsg-1 en anderen)

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Python3 interface minimap2

Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database. Typical use cases include: (1) mapping PacBio or Oxford Nanopore genomic reads to the human genome; (2) finding overlaps between long reads with error rate up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA or Direct RNA reads against a reference genome; (4) aligning Illumina single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full- genome alignment between two closely related species with divergence below ~15%.

This package contains the Python3 interface for using minimap2.

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python3-mappy downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Versie Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 2.27+dfsg-1+b2 174,3 kB498,0 kB [overzicht]
amd64 2.27+dfsg-1+b3 145,6 kB375,0 kB [overzicht]
arm64 2.27+dfsg-1+b4 139,3 kB367,0 kB [overzicht]
armel 2.27+dfsg-1+b3 153,9 kB427,0 kB [overzicht]
armhf 2.27+dfsg-1+b3 155,6 kB363,0 kB [overzicht]
hppa (unofficial port) 2.27+dfsg-1+b3 184,1 kB473,0 kB [overzicht]
i386 2.27+dfsg-1+b3 183,1 kB524,0 kB [overzicht]
ia64 (unofficial port) 2.24+dfsg-3+b1 256,8 kB1.500,0 kB [overzicht]
loong64 (unofficial port) 2.27+dfsg-1+b3 160,3 kB431,0 kB [overzicht]
m68k (unofficial port) 2.27+dfsg-1+b2 167,8 kB784,0 kB [overzicht]
mips64el 2.27+dfsg-1+b3 167,0 kB509,0 kB [overzicht]
ppc64 (unofficial port) 2.27+dfsg-1+b3 179,8 kB559,0 kB [overzicht]
ppc64el 2.27+dfsg-1+b3 169,5 kB495,0 kB [overzicht]
riscv64 2.27+dfsg-1+b3 180,7 kB359,0 kB [overzicht]
s390x 2.27+dfsg-1+b3 189,7 kB499,0 kB [overzicht]
sh4 (unofficial port) 2.27+dfsg-1+b2 206,1 kB428,0 kB [overzicht]
sparc64 (unofficial port) 2.27+dfsg-1+b3 153,9 kB1.077,0 kB [overzicht]
x32 (unofficial port) 2.27+dfsg-1+b1 177,9 kB738,0 kB [overzicht]