Paket: spaln (3.0.2+dfsg-2) [debports]
Links für spaln
Debian-Ressourcen:
Quellcode-Paket herunterladen:
Nicht gefundenBetreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
splicing-aware transcript-alignment to genomic DNA
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.
spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.
Andere Pakete mit Bezug zu spaln
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
-
- dep: libgcc-s1 (>= 3.3.1)
- GCC Support-Bibliothek
-
- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library -- Bibliothekspaket
-
- dep: libstdc++6 (>= 5)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
-
- dep: spaln-data
- splicing-aware transcript-alignment to genomic DNA (data)
-
- dep: zlib1g (>= 1:1.2.0.2)
- Kompressions-Bibliothek - Laufzeit
spaln herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| ppc64 (inoffizielle Portierung) | 555,4 kB | 2.690,0 kB | [Liste der Dateien] |