[ Quellcode: tophat-recondition ]
Paket: tophat-recondition (1.4-3)
Links für tophat-recondition
Debian-Ressourcen:
Quellcode-Paket tophat-recondition herunterladen:
- [tophat-recondition_1.4-3.dsc]
- [tophat-recondition_1.4.orig.tar.gz]
- [tophat-recondition_1.4-3.debian.tar.xz]
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Steffen Moeller (QS-Seite)
- Michael R. Crusoe (QS-Seite)
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
post-processor for TopHat unmapped reads
tophat-recondition is a post-processor for TopHat unmapped reads (contained in unmapped.bam), making them compatible with downstream tools (e.g., the Picard suite, samtools, GATK) (TopHat issue #17). It also works around bugs in TopHat:
* the "mate is unmapped" SAM flag is not set on any reads in the unmapped.bam file (TopHat issue #3) * the mapped mate of an unmapped read can be absent from accepted_hits.bam, creating a mismatch between the file and the unmapped read's flags (TopHat issue #16)
Andere Pakete mit Bezug zu tophat-recondition
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- sug: tophat2
- Paket nicht verfügbar
tophat-recondition herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 10,9 kB | 36,0 kB | [Liste der Dateien] |