原始碼套件：roary（3.12.0+dfsg-2）
本原始碼套件構建了以下這些二進位制包：
- roary
- high speed stand alone pan genome pipeline
其他與 roary 有關的套件
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- adep: debhelper (>= 11~)
- helper programs for debian/rules
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- adep: dh-dist-zilla
- debhelper add-on to call dzil build and clean up after the build
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- adep: libdist-zilla-plugin-podweaver-perl
- Dist::Zilla plugin to use Pod::Weaver to generate Pod documentation
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- adep: bioperl
- Perl tools for computational molecular biology
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- adep: libarray-utils-perl
- collection of small utils for array manipulation
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- adep: libenv-path-perl
- Perl module implementing advanced operations on path variables
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- adep: libexception-class-perl
- module that allows you to declare real exception classes in Perl
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- adep: libfile-find-rule-perl
- module to search for files based on rules
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- adep: libfile-grep-perl
- module for pattern matching in a series of files
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- adep: libfile-slurper-perl
- simple, sane and efficient module to slurp a file
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- adep: libfile-which-perl
- Perl module for searching paths for executable programs
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- adep: libfindbin-libs-perl
- Perl module to use a relative path for lib directories
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- adep: libgraph-perl
- Perl module for graph data structures and algorithms
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- adep: libgraph-readwrite-perl
- module for reading and writing directed graphs
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- adep: liblog-log4perl-perl
- Perl port of the widely popular log4j logging package
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- adep: libmoose-perl
- modern Perl object system framework
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- adep: libperlio-utf8-strict-perl
- fast and correct UTF-8 Perl IO module
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- adep: libtest-most-perl
- Perl module with the most commonly needed test functions and features
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- adep: libtest-file-perl
- Perl module to test file attributes
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- adep: libtest-files-perl
- module to ease testing with files and directories
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- adep: libtest-output-perl
- perl module to test stdout and stderr messages
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- adep: libtext-csv-perl
- comma-separated values manipulator (using XS or PurePerl)
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- adep: bedtools
- suite of utilities for comparing genomic features
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- adep: cd-hit
- suite of programs designed to quickly group sequences
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- adep: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- adep: mcl
- Markov Cluster algorithm
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- adep: parallel
- build and execute command lines from standard input in parallel
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- adep: prank
- Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
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- adep: r-base-core
- GNU R core of statistical computation and graphics system
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- adep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- adep: fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
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- idep: perl
- Larry Wall's Practical Extraction and Report Language
Download roary
| 檔案 | 大小（單位：kB） | MD5 校驗碼 |
|---|---|---|
| roary_3.12.0+dfsg-2.dsc | 2。5 kB | f29a03411a3f88fa1a0ccd4701e65d62 |
| roary_3.12.0+dfsg.orig.tar.gz | 461。4 kB | 8b9ea0c0d190a9ed4dccd02e63780ff4 |
| roary_3.12.0+dfsg-2.debian.tar.xz | 6。2 kB | 9d1a25ebfb6d557fd4e920cc04bcd8d5 |
- Debian 套件原始碼倉庫（VCS：Git）
- https://salsa.debian.org/med-team/roary.git
- Debian 套件原始碼倉庫（可線上瀏覽）
- https://salsa.debian.org/med-team/roary