原始碼套件：salmon（0.12.0+ds1-1）
本原始碼套件構建了以下這些二進位制包：
- salmon
- wicked-fast transcript quantification from RNA-seq data
其他與 salmon 有關的套件
|
|
-
- adep: debhelper (>= 11~)
- helper programs for debian/rules
-
- adep: cmake
- cross-platform, open-source make system
-
- adep: libboost-filesystem-dev
- filesystem operations (portable paths, iteration over directories, etc) in C++ (default version)
-
- adep: libboost-system-dev
- Operating system (e.g. diagnostics support) library (default version)
-
- adep: libboost-iostreams-dev
- Boost.Iostreams Library development files (default version)
-
- adep: libboost-thread-dev
- portable C++ multi-threading (default version)
-
- adep: libboost-program-options-dev
- program options library for C++ (default version)
-
- adep: libboost-timer-dev
- C++ wall clock and CPU process timers (default version)
-
- adep: libjellyfish-2.0-dev (>> 2.2.3-2)
- count k-mers in DNA sequences (development files of jellyfish)
-
- adep: libpthread-stubs0-dev
- pthread stubs not provided by native libc, development files
-
- adep: libsparsehash-dev
- Google's extremely memory-efficient C++ hash_map implementation
-
- adep: libdivsufsort-dev
- libdivsufsort header files
-
- adep: libbwa-dev
- Burrows-Wheeler Aligner source files
-
- adep: pkg-config
- manage compile and link flags for libraries
-
- adep: libjemalloc-dev
- development files and documentation for jemalloc
-
- adep: libcereal-dev
- C++11 library for serialization
-
- adep: libtbb-dev
- parallelism library for C++ - development files
-
- adep: libgff-dev
- GFF/GTF parsing from cufflinks as a library
-
- adep: libstaden-read-dev
- development files for libstaden-read
-
- adep: libspdlog-dev
- Very fast, header only, C++ logging library
-
- adep: libtclap-dev
- Templatized command-line argument parser for C++
-
- adep: help2man
- Automatic manpage generator
-
- adep: sphinx-doc
- documentation generator for Python projects - documentation
-
- adep: python3-sphinx
- documentation generator for Python projects (implemented in Python 3)
-
- adep: python3-sphinx-rtd-theme
- sphinx theme from readthedocs.org (Python 3)
-
- adep: zlib1g-dev
- compression library - development
-
- adep: libeigen3-dev
- lightweight C++ template library for linear algebra
-
- adep: libbz2-dev
- high-quality block-sorting file compressor library - development
-
- adep: liblzma-dev
- XZ-format compression library - development files
-
- adep: rapmap-dev (>= 0.12.0~)
- rapmap - rapid sensitive and accurate DNA read mapping (some headers)
Download salmon
| 檔案 | 大小（單位：kB） | MD5 校驗碼 |
|---|---|---|
| salmon_0.12.0+ds1-1.dsc | 2。4 kB | 099d2ae92e055b0c5874e33a624ee209 |
| salmon_0.12.0+ds1.orig.tar.xz | 6，398。3 kB | 1cedbf2dfe6c8a4285ed9135e72a78ba |
| salmon_0.12.0+ds1-1.debian.tar.xz | 8。7 kB | d46b4c07b9305f8550421fc46e21d04e |
- Debian 套件原始碼倉庫（VCS：Git）
- https://salsa.debian.org/med-team/salmon.git
- Debian 套件原始碼倉庫（可線上瀏覽）
- https://salsa.debian.org/med-team/salmon