套件：circlator（1.5.6-11）

circlator 的相關連結

Debian 的資源：

下載原始碼套件 circlator：

維護小組：

外部的資源：

主頁 [sanger-pathogens.github.io]

相似套件：

circularize genome assemblies

Circlator is a tool to automate assembly circularization for bacterial and small eukaryotic genomes and produce accurate linear representations of circular sequences.

標籤: 生物學: 核酸, 領域: 生物學, field::biology:bioinformatics, implemented-in::python, 角色: 程式, 科學: science::calculation, works-with::biological-sequence, 處理: 檔案

其他與 circlator 有關的套件

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建議

增強

dep: bwa

Burrows-Wheeler Aligner
dep: canu

single molecule sequence assembler for genomes
dep: fastaq

FASTA and FASTQ file manipulation tools
dep: mummer

Efficient sequence alignment of full genomes
dep: prodigal

Microbial (bacterial and archaeal) gene finding program
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-openpyxl

Python 3 module to read/write OpenXML xlsx/xlsm files
dep: python3-packaging

core utilities for python3 packages
dep: python3-pymummer

Python 3 interface to MUMmer
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats

rec: spades

genome assembler for single-cell and isolates data sets

下載 circlator

下載可用於所有硬體架構的
硬體架構	套件大小	安裝後大小	檔案
all	4，496。8 kB	11，642。0 kB	[檔案列表]