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[ 原始碼: bowtie  ]

套件:bowtie(1.2.2+dfsg-4)

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Ultrafast memory-efficient short read aligner

This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run.

Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).

標籤: 領域: 生物學, 生物資訊學, 實做語言: implemented-in::c++, interface::commandline, 角色: 程式, 科學: science::calculation, scope::utility, Purpose: Analysing, use::comparing, works-with::biological-sequence

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下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 1,631。2 kB7,087。0 kB [檔案列表]
arm64 1,244。6 kB6,387。0 kB [檔案列表]