套件：trnascan-se-common（2.0.7+ds-1） [non-free]
trnascan-se-common 的相關連結
Debian 的資源：
下載原始碼套件 trnascan-se：
- [trnascan-se_2.0.7+ds-1.dsc]
- [trnascan-se_2.0.7+ds.orig.tar.gz]
- [trnascan-se_2.0.7+ds-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [lowelab.ucsc.edu]
相似套件：
detection of transfer RNA genes in genomic sequence (common files)
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection programs are used as fast, first-pass prefilters to identify candidate tRNAs, which are then analyzed by a highly selective tRNA covariance model. This work represents a practical application of RNA covariance models, which are general, probabilistic secondary structure profiles based on stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s. Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
This package contains the architecture-independent common files.