[ 原始碼： smrtanalysis ]
套件：smrtanalysis（0~20210111）
software suite for single molecule, real-time sequencing
SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.
This is a metapackage that depends on the components of SMRT Analysis.
其他與 smrtanalysis 有關的套件
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- dep: blasr
- mapping single-molecule sequencing reads
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- dep: pbbamtools
- processing Pacific Biosciences binary alignment/map files
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- dep: pbdagcon
- sequence consensus using directed acyclic graphs
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- sug: falcon
- 套件暫時不可用
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- sug: kineticstools
- detection of DNA modifications
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- sug: pbalign
- 套件暫時不可用
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- sug: pbbarcode
- 套件暫時不可用
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- sug: pbgenomicconsensus
- 套件暫時不可用
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- sug: pbh5tools
- 套件暫時不可用