[ 原始碼： ataqv ]
套件：ataqv（1.2.1+ds-1 以及其他的）
ATAC-seq QC and visualization
A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.
其他與 ataqv 有關的套件
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- dep: fonts-font-awesome
- iconic font designed for use with Twitter Bootstrap
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- dep: libboost-chrono1.74.0 (>= 1.74.0)
- C++ representation of time duration, time point, and clocks
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- dep: libboost-filesystem1.74.0 (>= 1.74.0)
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.74.0 (>= 1.74.0)
- Boost.Iostreams Library
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- dep: libc6 (>= 2.4)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libgcc-s1 (>= 3.5)
- GCC 支援函式庫
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libjs-jquery
- JavaScript library for dynamic web applications
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- dep: libjs-jquery-datatables
- jQuery plug-in that makes nice tables from different data sources
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- dep: libjs-jquery-datatables-extensions
- extensions for the jQuery plug-in for tables from different data sources
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- dep: libncurses6 (>= 6)
- shared libraries for terminal handling
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: node-d3
- Data-Driven Documents to visualize data
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- dep: node-normalize.css
- Modern alternative to CSS resets
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- sug: macs
- Model-based Analysis of ChIP-Seq on short reads sequencers
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- sug: picard-tools
- Command line tools to manipulate SAM and BAM files
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- sug: wget
- retrieves files from the web