软件包:python3-dna-jellyfish(2.3.1-3 以及其他的)
python3-dna-jellyfish 的相关链接
Debian 的资源:
下载源码包 jellyfish:
维护小组:
- Debian Med Packaging Team (QA 页面, 邮件存档)
- Shaun Jackman (QA 页面)
- Andreas Tille (QA 页面)
- Michael R. Crusoe (QA 页面)
- Étienne Mollier (QA 页面)
外部的资源:
- 主页 [www.genome.umd.edu]
相似软件包:
count k-mers in DNA sequences (Python bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the Python bindings of jellyfish.
其他与 python3-dna-jellyfish 有关的软件包
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- dep: libc6 (>= 2.34) [除 ia64]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libc6.1 (>= 2.31) [ia64]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6.1-udeb
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- dep: libgcc-s1 (>= 3.0) [除 hppa, ia64, riscv64]
- GCC 支持库
- dep: libgcc-s1 (>= 3.4) [riscv64]
- dep: libgcc-s1 (>= 4.2) [ia64]
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC 支持库
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- dep: libjellyfish-2.0-2 (>= 2.3.0) [ia64]
- count k-mers in DNA sequences (dynamic library of jellyfish)
- dep: libjellyfish-2.0-2 (>= 2.3.1) [除 ia64]
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- dep: libstdc++6 (>= 13.1) [除 ia64]
- GNU 标准 C++ 库,第3版
- dep: libstdc++6 (>= 9) [ia64]
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: python3
- 交互式高级面向对象语言(默认 python3 版本)
- dep: python3 (<< 3.10) [ia64]
- dep: python3 (<< 3.13) [除 ia64]
- dep: python3 (>= 3.11~) [除 ia64]
- dep: python3 (>= 3.9~) [ia64]
下载 python3-dna-jellyfish
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
amd64 | 2.3.1-3+b3 | 65.1 kB | 326.0 kB | [文件列表] |
arm64 | 2.3.1-3+b3 | 62.6 kB | 438.0 kB | [文件列表] |
hppa (非官方移植版) | 2.3.1-2+b1 | 74.2 kB | 384.0 kB | [文件列表] |
ia64 (非官方移植版) | 2.3.0-12 | 67.0 kB | 280.0 kB | [文件列表] |
mips64el | 2.3.1-3+b4 | 60.0 kB | 452.0 kB | [文件列表] |
ppc64el | 2.3.1-3+b4 | 66.7 kB | 438.0 kB | [文件列表] |
riscv64 | 2.3.1-3+b4 | 68.2 kB | 286.0 kB | [文件列表] |