[ 源代码： r-bioc-dada2 ]
软件包：r-bioc-dada2（1.30.0+dfsg-1）
r-bioc-dada2 的相关链接
Debian 的资源：
下载源码包 r-bioc-dada2：
- [r-bioc-dada2_1.30.0+dfsg-1.dsc]
- [r-bioc-dada2_1.30.0+dfsg.orig.tar.xz]
- [r-bioc-dada2_1.30.0+dfsg-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
sample inference from amplicon sequencing data
The dada2 package contributes to software workflows to interpret sequencing data from microbiota - the relative abundance of bacterial and/or yeast, typically measured in the gut. It infers exact amplicon sequence variants (ASVs) from high-throughput amplicon sequencing data, replacing the coarser and less accurate OTU clustering approach. The dada2 pipeline takes as input demultiplexed fastq files, and outputs the sequence variants and their sample-wise abundances after removing substitution and chimera errors. Taxonomic classification is available via a native implementation of the RDP naive Bayesian classifier, and species-level assignment to 16S rRNA gene fragments by exact matching.
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