软件包：canu（2.0+dfsg-1）

canu 的相关链接

Debian 的资源：

下载源码包 canu：

维护者：

Debian Med Packaging Team (QA 页面, 邮件存档)

外部的资源：

主页 [canu.readthedocs.org]

相似软件包：

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

其他与 canu 有关的软件包

依赖

推荐

建议

增强

dep: gnuplot

Command-line driven interactive plotting program.
同时作为一个虚包由这些包填实： gnuplot-nox, gnuplot-qt, gnuplot-x11
dep: libc6 (>= 2.29)

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
dep: libfilesys-df-perl

Module to obtain filesystem disk space information
dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386, mipsel]

GCC 支持库

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386, mipsel]
dep: libgomp1 (>= 6)

GCC OpenMP（GOMP）支持库
dep: libstdc++6 (>= 5.2)

GNU 标准 C++ 库，第3版
dep: mhap (>= 2.1.3)

locality-sensitive hashing to detect long-read overlaps
dep: perl

拉里沃尔的实用报表提取语言(Perl)

sug: nanopolish

consensus caller for nanopore sequencing data
sug: pbgenomicconsensus

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下载 canu

下载可用于所有硬件架构的
硬件架构	软件包大小	安装后大小	文件
amd64	1,226.6 kB	9,210.0 kB	[文件列表]
arm64	1,100.2 kB	8,667.0 kB	[文件列表]
armel	1,075.7 kB	8,521.0 kB	[文件列表]
armhf	1,101.1 kB	6,673.0 kB	[文件列表]
i386	1,352.2 kB	10,418.0 kB	[文件列表]
mips64el	1,342.8 kB	12,314.0 kB	[文件列表]
mipsel	1,386.0 kB	11,249.0 kB	[文件列表]
ppc64el	1,218.4 kB	12,366.0 kB	[文件列表]
s390x	1,072.7 kB	9,029.0 kB	[文件列表]