全部搜索项
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ 源代码: augustus  ]

软件包:augustus(3.4.0+dfsg2-2)

augustus 的相关链接

Screenshot

Debian 的资源:

下载源码包 augustus

维护小组:

外部的资源:

相似软件包:

gene prediction in eukaryotic genomes

AUGUSTUS is a software for gene prediction in eukaryotic genomic sequences that is based on a generalized hidden Markov model (HMM), a probabilistic model of a sequence and its gene structure. After learning gene structures from a reference annotation, AUGUSTUS uses the HMM to recognize genes in a new sequence and annotates it with the regions of identified genes. External hints, e.g. from RNA sequencing, EST or protein alignments etc. can be used to guide and improve the gene finding process. The result is the set of most likely gene structures that comply with all given user constraints, if such gene structures exist. AUGUSTUS already includes prebuilt HMMs for many species, as well as scripts to train custom models using annotated genomes.

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::c++, interface::commandline, 角色: 程序, 科学: science::calculation, scope::utility, 界面工具箱: Ncurses TUI, Purpose: use::analysing, works-with::biological-sequence

其他与 augustus 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • 增强

下载 augustus

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
armel 1,597.0 kB9,404.0 kB [文件列表]