[ 源代码： libmems ]
软件包：libmems-dev（1.6.0+4725-9 以及其他的）
development library to support DNA string matching and comparative genomics
libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.
This is the development package containing the statically linked library and the header files.
其他与 libmems-dev 有关的软件包
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- dep: libboost-filesystem1.74-dev
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.74-dev
- Boost.Iostreams Library development files
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- dep: libgenome-dev
- toolkit for developing bioinformatic related software (devel)
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- dep: libmems1 (= 1.6.0+4725-9+b1)
- library to support DNA string matching and comparative genomics
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- dep: libmuscle-dev
- multiple alignment development library for protein sequences