Пакунок: artemis (18.2.0+dfsg-4)

Links for artemis

Debian Resources:

Download Source Package artemis:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Andreas Tille (QA Page)
Pierre Gruet (QA Page)

External Resources:

Homepage [sanger-pathogens.github.io]

Similar packages:

genome browser and annotation tool

Artemis is a genome browser and annotation tool that allows visualisation of sequence features, next generation data and the results of analyses within the context of the sequence, and also its six-frame translation.

This package includes the Artemis genome browser, the Artemis Comparison Tool (ACT), and the DNAplotter and BamView utilities.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::java, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Purpose: Analysing, use::comparing, use::editing, Works with: Biological Sequence, X Window System: Application

Інші пакунки пов'язані з artemis

depends

recommends

suggests

enhances

dep: default-jre

Standard Java or Java compatible Runtime
dep: jemboss

graphical user interface to EMBOSS
dep: libbatik-java (>= 1.17)

xml.apache.org SVG Library
dep: libbiojava-java (>= 1:1.9.5+dfsg)

Java API to biological data and applications (default version)
dep: libcglib-java (>= 3.3.0)

Code generation library for Java
dep: libcommons-lang3-java

Apache Commons Lang utility classes
dep: libcommons-logging-java (>= 1.3.0)

common wrapper interface for several logging APIs
dep: libcommons-net-java

Apache Commons Net - Java client API for basic Internet protocols
dep: libhtsjdk-java

Java API for high-throughput sequencing data (HTS) formats
dep: libibatis-java (>= 2.3.4.726)

iBATIS Data Mapper framework
dep: libj2ssh-java (>= 0.2.9)

Java library for the SSH protocol
dep: liblog4j1.2-java

Logging library for java
dep: libpicard-java

Java library to manipulate SAM and BAM files
dep: libpostgresql-jdbc-java

Java database (JDBC) driver for PostgreSQL

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