Paket: python-biom-format (2.1.7+dfsg-2)

python-biom-format için bağlantılar

Debian Kaynakları:

python-biom-format Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [biom-format.org]

Benzer paketler:

Biological Observation Matrix (BIOM) format (Python 2)

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project.

The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome.

This package provides the BIOM format library for the Python 2 interpreter.

python-biom-format ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.17) [arm64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.4) [arm64 değil]
dep: pyqi

Python framework for wrapping general commands in multiple interfaces
dep: python

interactive high-level object-oriented language (Python2 version)

dep: python (<< 2.8)

dep: python (>= 2.7~)
dep: python-click

Wrapper around optparse for command line utilities - Python 2.7
dep: python-future

single-source support for Python 3 and 2 - Python 2.x
dep: python-numpy (>= 1:1.16.0~rc1)

Numerical Python adds a fast array facility to the Python language
dep: python-numpy-abi9

sanal paketi sağlayan python-numpy
dep: python-pandas

data structures for "relational" or "labeled" data
dep: python-scipy

scientific tools for Python
dep: python-six (>= 1.10.0)

Python 2 and 3 compatibility library (Python 2 interface)

sug: python-biom-format-doc

documentation for BIOM format

python-biom-format indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	139,9 kB	683,0 kB	[dosya listesi]
arm64	128,5 kB	667,0 kB	[dosya listesi]
armhf	134,0 kB	602,0 kB	[dosya listesi]
i386	134,1 kB	687,0 kB	[dosya listesi]